We envision to keep fostering on continuous integration and development of highly reproducible workflows.
…In Progress…
.
├── config
│ ├── pbs-torque
│ └── slurm
├── dags
├── data
│ └── mothur
│ ├── logs
│ ├── process
│ │ ├── error_analysis
│ │ └── intermediate
│ ├── raw
│ ├── reads
│ └── references
├── envs
├── images
├── library
└── workflow
├── envs
├── rules
├── schemas
└── scripts
21 directories
Note: Some snakemake rules available in existing workflows3 are integrated but with slight modification.
The preliminary analysis (alpha_beta_diversity rule) is
part of the bioinformatics analysis. It includes: